data rna sequencing data Search Results


rna sequencing data  (Illumina Inc)
97
Illumina Inc rna sequencing data
(A) Heatmap analysis of the phenylpropanoid biosynthetic genes in tartary buckwheat plants in response to cold. The response of the phenylpropanoid biosynthetic genes was obtained from <t>RNA-sequencing</t> analysis. The log 2 fold change values for each time point were calculated. Scales indicate the color assigned to each log2 fold change. (B) QRT-PCR analysis of the phenylpropanoid biosynthetic genes in tartary buckwheat plants in response to cold. Six-day-old light-grown plants were treated at 4°C for varying periods of time (hour), and total RNA isolated was subjected to quantitative RT-PCR. Relative fold changes were plotted after normalization to histone H3. Mean values and SE from triplicate biological experiments are plotted. Asterisks indicate significant differences compared with the plant at 0 h using Student’s t test (*P < 0.05; **P < 0.01). PAL, phenylalanine ammonia-lyase; C4H, cinnamate 4-hydroxylase; 4CL, 4-coumarate-CoA ligase; OMT, O-methyltransferase; HCT, hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase; CHS, chalcone synthase; CHI, chalcone isomerase; CHIL, chalcone isomerase like; F3H, flavanone-3-hydroxylase; F3’H, flavonoid-3’-hydroxylase; FLS, flavonol synthase; DFR, dihydroflavonol reductase; ANS, anthocyanin synthase.
Rna Sequencing Data, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 97/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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deseq normalization methods for illumina high-throughput rna sequencing data analysis  (Illumina Inc)
90
Illumina Inc deseq normalization methods for illumina high-throughput rna sequencing data analysis
(A) Heatmap analysis of the phenylpropanoid biosynthetic genes in tartary buckwheat plants in response to cold. The response of the phenylpropanoid biosynthetic genes was obtained from <t>RNA-sequencing</t> analysis. The log 2 fold change values for each time point were calculated. Scales indicate the color assigned to each log2 fold change. (B) QRT-PCR analysis of the phenylpropanoid biosynthetic genes in tartary buckwheat plants in response to cold. Six-day-old light-grown plants were treated at 4°C for varying periods of time (hour), and total RNA isolated was subjected to quantitative RT-PCR. Relative fold changes were plotted after normalization to histone H3. Mean values and SE from triplicate biological experiments are plotted. Asterisks indicate significant differences compared with the plant at 0 h using Student’s t test (*P < 0.05; **P < 0.01). PAL, phenylalanine ammonia-lyase; C4H, cinnamate 4-hydroxylase; 4CL, 4-coumarate-CoA ligase; OMT, O-methyltransferase; HCT, hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase; CHS, chalcone synthase; CHI, chalcone isomerase; CHIL, chalcone isomerase like; F3H, flavanone-3-hydroxylase; F3’H, flavonoid-3’-hydroxylase; FLS, flavonol synthase; DFR, dihydroflavonol reductase; ANS, anthocyanin synthase.
Deseq Normalization Methods For Illumina High Throughput Rna Sequencing Data Analysis, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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deseq normalization methods for illumina high-throughput rna sequencing data analysis - by Bioz Stars, 2026-03
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single cell rna sequencing data  (Human Protein Atlas)
90
Human Protein Atlas single cell rna sequencing data
(A) Heatmap analysis of the phenylpropanoid biosynthetic genes in tartary buckwheat plants in response to cold. The response of the phenylpropanoid biosynthetic genes was obtained from <t>RNA-sequencing</t> analysis. The log 2 fold change values for each time point were calculated. Scales indicate the color assigned to each log2 fold change. (B) QRT-PCR analysis of the phenylpropanoid biosynthetic genes in tartary buckwheat plants in response to cold. Six-day-old light-grown plants were treated at 4°C for varying periods of time (hour), and total RNA isolated was subjected to quantitative RT-PCR. Relative fold changes were plotted after normalization to histone H3. Mean values and SE from triplicate biological experiments are plotted. Asterisks indicate significant differences compared with the plant at 0 h using Student’s t test (*P < 0.05; **P < 0.01). PAL, phenylalanine ammonia-lyase; C4H, cinnamate 4-hydroxylase; 4CL, 4-coumarate-CoA ligase; OMT, O-methyltransferase; HCT, hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase; CHS, chalcone synthase; CHI, chalcone isomerase; CHIL, chalcone isomerase like; F3H, flavanone-3-hydroxylase; F3’H, flavonoid-3’-hydroxylase; FLS, flavonol synthase; DFR, dihydroflavonol reductase; ANS, anthocyanin synthase.
Single Cell Rna Sequencing Data, supplied by Human Protein Atlas, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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deconvolution of expression for nascent rna sequencing data (denr)  (Cold Spring Harbor Laboratory Meetings)
90
Cold Spring Harbor Laboratory Meetings deconvolution of expression for nascent rna sequencing data (denr)
(A) Heatmap analysis of the phenylpropanoid biosynthetic genes in tartary buckwheat plants in response to cold. The response of the phenylpropanoid biosynthetic genes was obtained from <t>RNA-sequencing</t> analysis. The log 2 fold change values for each time point were calculated. Scales indicate the color assigned to each log2 fold change. (B) QRT-PCR analysis of the phenylpropanoid biosynthetic genes in tartary buckwheat plants in response to cold. Six-day-old light-grown plants were treated at 4°C for varying periods of time (hour), and total RNA isolated was subjected to quantitative RT-PCR. Relative fold changes were plotted after normalization to histone H3. Mean values and SE from triplicate biological experiments are plotted. Asterisks indicate significant differences compared with the plant at 0 h using Student’s t test (*P < 0.05; **P < 0.01). PAL, phenylalanine ammonia-lyase; C4H, cinnamate 4-hydroxylase; 4CL, 4-coumarate-CoA ligase; OMT, O-methyltransferase; HCT, hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase; CHS, chalcone synthase; CHI, chalcone isomerase; CHIL, chalcone isomerase like; F3H, flavanone-3-hydroxylase; F3’H, flavonoid-3’-hydroxylase; FLS, flavonol synthase; DFR, dihydroflavonol reductase; ANS, anthocyanin synthase.
Deconvolution Of Expression For Nascent Rna Sequencing Data (Denr), supplied by Cold Spring Harbor Laboratory Meetings, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/deconvolution of expression for nascent rna sequencing data (denr)/product/Cold Spring Harbor Laboratory Meetings
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deconvolution of expression for nascent rna sequencing data (denr) - by Bioz Stars, 2026-03
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single-cell cool-seq  (Illumina Inc)
90
Illumina Inc single-cell cool-seq
Oocyte and embryo developmental stage, method of collection and <t> sequencing </t> for DNA methylation
Single Cell Cool Seq, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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whole transcriptome rna sequencing data  (Biotechnology Information)
90
Biotechnology Information whole transcriptome rna sequencing data
Oocyte and embryo developmental stage, method of collection and <t> sequencing </t> for DNA methylation
Whole Transcriptome Rna Sequencing Data, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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whole transcriptome rna sequencing data - by Bioz Stars, 2026-03
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single-cell rna sequencing  (Muris Inc)
90
Muris Inc single-cell rna sequencing
Oocyte and embryo developmental stage, method of collection and <t> sequencing </t> for DNA methylation
Single Cell Rna Sequencing, supplied by Muris Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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single-cell rna sequencing - by Bioz Stars, 2026-03
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rna sequencing data from whole blood  (Illumina Inc)
90
Illumina Inc rna sequencing data from whole blood
Oocyte and embryo developmental stage, method of collection and <t> sequencing </t> for DNA methylation
Rna Sequencing Data From Whole Blood, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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rna sequencing data from whole blood - by Bioz Stars, 2026-03
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mrna and mirna expression data rna-sequencing (rna-seq)/mirna-seq  (Illumina Inc)
90
Illumina Inc mrna and mirna expression data rna-sequencing (rna-seq)/mirna-seq
Oocyte and embryo developmental stage, method of collection and <t> sequencing </t> for DNA methylation
Mrna And Mirna Expression Data Rna Sequencing (Rna Seq)/Mirna Seq, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/mrna and mirna expression data rna-sequencing (rna-seq)/mirna-seq/product/Illumina Inc
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rna-sequencing data  (Human Protein Atlas)
90
Human Protein Atlas rna-sequencing data
Oocyte and embryo developmental stage, method of collection and <t> sequencing </t> for DNA methylation
Rna Sequencing Data, supplied by Human Protein Atlas, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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rna-seq data from goosegrass aboveground seedling sequenced with illumina genome analyzer iix  (Illumina Inc)
90
Illumina Inc rna-seq data from goosegrass aboveground seedling sequenced with illumina genome analyzer iix
Oocyte and embryo developmental stage, method of collection and <t> sequencing </t> for DNA methylation
Rna Seq Data From Goosegrass Aboveground Seedling Sequenced With Illumina Genome Analyzer Iix, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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total rna sequencing data  (Viroscope)
90
Viroscope total rna sequencing data
Oocyte and embryo developmental stage, method of collection and <t> sequencing </t> for DNA methylation
Total Rna Sequencing Data, supplied by Viroscope, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


(A) Heatmap analysis of the phenylpropanoid biosynthetic genes in tartary buckwheat plants in response to cold. The response of the phenylpropanoid biosynthetic genes was obtained from RNA-sequencing analysis. The log 2 fold change values for each time point were calculated. Scales indicate the color assigned to each log2 fold change. (B) QRT-PCR analysis of the phenylpropanoid biosynthetic genes in tartary buckwheat plants in response to cold. Six-day-old light-grown plants were treated at 4°C for varying periods of time (hour), and total RNA isolated was subjected to quantitative RT-PCR. Relative fold changes were plotted after normalization to histone H3. Mean values and SE from triplicate biological experiments are plotted. Asterisks indicate significant differences compared with the plant at 0 h using Student’s t test (*P < 0.05; **P < 0.01). PAL, phenylalanine ammonia-lyase; C4H, cinnamate 4-hydroxylase; 4CL, 4-coumarate-CoA ligase; OMT, O-methyltransferase; HCT, hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase; CHS, chalcone synthase; CHI, chalcone isomerase; CHIL, chalcone isomerase like; F3H, flavanone-3-hydroxylase; F3’H, flavonoid-3’-hydroxylase; FLS, flavonol synthase; DFR, dihydroflavonol reductase; ANS, anthocyanin synthase.

Journal: bioRxiv

Article Title: Comparative Transcriptomic and Metabolomic Analyses in Response to Cold in Tartary Buckwheat ( Fagopyrum tataricum )

doi: 10.1101/278432

Figure Lengend Snippet: (A) Heatmap analysis of the phenylpropanoid biosynthetic genes in tartary buckwheat plants in response to cold. The response of the phenylpropanoid biosynthetic genes was obtained from RNA-sequencing analysis. The log 2 fold change values for each time point were calculated. Scales indicate the color assigned to each log2 fold change. (B) QRT-PCR analysis of the phenylpropanoid biosynthetic genes in tartary buckwheat plants in response to cold. Six-day-old light-grown plants were treated at 4°C for varying periods of time (hour), and total RNA isolated was subjected to quantitative RT-PCR. Relative fold changes were plotted after normalization to histone H3. Mean values and SE from triplicate biological experiments are plotted. Asterisks indicate significant differences compared with the plant at 0 h using Student’s t test (*P < 0.05; **P < 0.01). PAL, phenylalanine ammonia-lyase; C4H, cinnamate 4-hydroxylase; 4CL, 4-coumarate-CoA ligase; OMT, O-methyltransferase; HCT, hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase; CHS, chalcone synthase; CHI, chalcone isomerase; CHIL, chalcone isomerase like; F3H, flavanone-3-hydroxylase; F3’H, flavonoid-3’-hydroxylase; FLS, flavonol synthase; DFR, dihydroflavonol reductase; ANS, anthocyanin synthase.

Article Snippet: Our Illumina RNA sequencing data for Fagopyrum tataricum have been deposited in the NCBI Short Read Archive database under accession number SRP132029.

Techniques: RNA Sequencing Assay, Quantitative RT-PCR, Isolation

Oocyte and embryo developmental stage, method of collection and sequencing for DNA methylation

Journal: iScience

Article Title: Mining RNAseq data reveals dynamic metaboloepigenetic profiles in human, mouse and bovine pre-implantation embryos

doi: 10.1016/j.isci.2022.103904

Figure Lengend Snippet: Oocyte and embryo developmental stage, method of collection and sequencing for DNA methylation

Article Snippet: Mouse , MII, 2, 4, 8C, MO, ICM and TE , In vivo , Single-cell multi-omics sequencing technology (single-cell COOL-seq) , Illumina HiSeq 2500 , ( ) .

Techniques: Sequencing, In Vivo, In Vitro, Methylation Sequencing, Biomarker Discovery